nest.graphstatistics package

Submodules

nest.graphstatistics.base module

class nest.graphstatistics.base.baseStatClass

Bases: object

get_csv()

Get the output to write to the csv file

get_report()

Get the output to write to the main report file for non temporal statistics

class nest.graphstatistics.base.baseTimeSeriesFromBase(Gs, optionsDict)

Bases: baseTimeSeriesStats

get_csv()

Get the output to write to the csv file for the time series data

makePlot()

Make a series of time series and histogram plots of the data

class nest.graphstatistics.base.baseTimeSeriesStats

Bases: object

get_csv()

Get the output to write to the csv file for the time series data

get_report()

Get the output to write to the main report for the time series data

class nest.graphstatistics.base.baseTimeSeriesWithHistPlot

Bases: baseTimeSeriesStats

get_csv()

Get the output to write to the csv file for the time series data

makePlot()

Make a series of histogram plots on the dataset

class nest.graphstatistics.base.baseWithHistPlot

Bases: baseStatClass

get_csv()

Get the output to write to the csv file

makePlot()

Make a series of histogram plots on the dataset

nest.graphstatistics.basic_statistics module

class nest.graphstatistics.basic_statistics.assortavitity(G, optionsDict)

Bases: baseStatClass

class nest.graphstatistics.basic_statistics.assortavitity_TS(Gs, optionsDict)

Bases: baseTimeSeriesFromBase

inbuiltMethod

alias of assortavitity

class nest.graphstatistics.basic_statistics.assortavitity_Undirected(G1, optionsDict)

Bases: baseStatClass

class nest.graphstatistics.basic_statistics.assortavitity_Undirected_TS(Gs, optionsDict)

Bases: baseTimeSeriesFromBase

inbuiltMethod

alias of assortavitity

class nest.graphstatistics.basic_statistics.degree_Hist(G, optionsDict)

Bases: baseWithHistPlot

directed = False

class nest.graphstatistics.basic_statistics.density(G, optionsDict)

Bases: baseStatClass

class nest.graphstatistics.basic_statistics.density_TS(Gs, optionsDict)

Bases: baseTimeSeriesFromBase

inbuiltMethod

alias of density

class nest.graphstatistics.basic_statistics.in_degree_Hist(G, optionsDict)

Bases: baseWithHistPlot

directed = True

class nest.graphstatistics.basic_statistics.in_weight_hist(G, optionsDict)

Bases: baseWithHistPlot

directed = True

class nest.graphstatistics.basic_statistics.number_degree0(G, optionsDict)

Bases: baseStatClass

directed = False

class nest.graphstatistics.basic_statistics.number_degree0_TS(Gs, optionsDict)

Bases: baseTimeSeriesFromBase

directed = False

inbuiltMethod

alias of number_degree0

class nest.graphstatistics.basic_statistics.number_degree1(G, optionsDict)

Bases: baseStatClass

directed = False

class nest.graphstatistics.basic_statistics.number_degree1_TS(Gs, optionsDict)

Bases: baseTimeSeriesFromBase

directed = False

inbuiltMethod

alias of number_degree1

class nest.graphstatistics.basic_statistics.number_indegree0(G, optionsDict)

Bases: baseStatClass

directed = True

class nest.graphstatistics.basic_statistics.number_indegree0_TS(Gs, optionsDict)

Bases: baseTimeSeriesFromBase

directed = True

inbuiltMethod

alias of number_indegree0

class nest.graphstatistics.basic_statistics.number_indegree1(G, optionsDict)

Bases: baseStatClass

directed = True

class nest.graphstatistics.basic_statistics.number_indegree1_TS(Gs, optionsDict)

Bases: baseTimeSeriesFromBase

directed = True

inbuiltMethod

alias of number_indegree1

class nest.graphstatistics.basic_statistics.number_of_connected(G, optionsDict)

Bases: baseStatClass

directed = False

class nest.graphstatistics.basic_statistics.number_of_connected_TS(Gs, optionsDict)

Bases: baseTimeSeriesFromBase

inbuiltMethod

alias of number_of_connected

class nest.graphstatistics.basic_statistics.number_of_edges(G, optionsDict)

Bases: baseStatClass

Basic statistic: Number of Edges

class nest.graphstatistics.basic_statistics.number_of_edges_TS(Gs, optionsDict)

Bases: baseTimeSeriesFromBase

Time Series Basic statistic: Number of Edges

inbuiltMethod

alias of number_of_edges

class nest.graphstatistics.basic_statistics.number_of_nodes(G, optionsDict)

Bases: baseStatClass

Basic statistic: Number of Nodes

class nest.graphstatistics.basic_statistics.number_of_nodes_TS(Gs, optionsDict)

Bases: baseTimeSeriesFromBase

Time Series Basic statistic: Number of Nodes

inbuiltMethod

alias of number_of_nodes

class nest.graphstatistics.basic_statistics.number_of_selfloops(G, optionsDict)

Bases: baseStatClass

class nest.graphstatistics.basic_statistics.number_of_selfloops_TS(Gs, optionsDict)

Bases: baseTimeSeriesFromBase

inbuiltMethod

alias of number_of_selfloops

class nest.graphstatistics.basic_statistics.number_of_strongly_connected(G, optionsDict)

Bases: baseStatClass

directed = True

class nest.graphstatistics.basic_statistics.number_of_strongly_connected_TS(Gs, optionsDict)

Bases: baseTimeSeriesFromBase

directed = True

inbuiltMethod

alias of number_of_strongly_connected

class nest.graphstatistics.basic_statistics.number_of_triangles(G, optionsDict)

Bases: baseStatClass

class nest.graphstatistics.basic_statistics.number_of_triangles_TS(Gs, optionsDict)

Bases: baseTimeSeriesFromBase

inbuiltMethod

alias of number_of_triangles

class nest.graphstatistics.basic_statistics.number_of_weakly_connected(G, optionsDict)

Bases: baseStatClass

directed = True

class nest.graphstatistics.basic_statistics.number_of_weakly_connected_TS(Gs, optionsDict)

Bases: baseTimeSeriesFromBase

directed = True

inbuiltMethod

alias of number_of_weakly_connected

class nest.graphstatistics.basic_statistics.number_outdegree0(G, optionsDict)

Bases: baseStatClass

directed = True

class nest.graphstatistics.basic_statistics.number_outdegree0_TS(Gs, optionsDict)

Bases: baseTimeSeriesFromBase

directed = True

inbuiltMethod

alias of number_outdegree0

class nest.graphstatistics.basic_statistics.number_outdegree1(G, optionsDict)

Bases: baseStatClass

directed = True

class nest.graphstatistics.basic_statistics.number_outdegree1_TS(Gs, optionsDict)

Bases: baseTimeSeriesFromBase

directed = True

inbuiltMethod

alias of number_outdegree1

class nest.graphstatistics.basic_statistics.out_degree_Hist(G, optionsDict)

Bases: baseWithHistPlot

directed = True

class nest.graphstatistics.basic_statistics.out_in_degree_heatmap(G, optionsDict)

Bases: baseStatClass

directed = True

makePlot()

class nest.graphstatistics.basic_statistics.out_weight_hist(G, optionsDict)

Bases: baseWithHistPlot

directed = True

class nest.graphstatistics.basic_statistics.reciprocity(G, optionsDict)

Bases: baseStatClass

class nest.graphstatistics.basic_statistics.reciprocity_TS(Gs, optionsDict)

Bases: baseTimeSeriesFromBase

inbuiltMethod

alias of reciprocity

class nest.graphstatistics.basic_statistics.weight_hist(G, optionsDict)

Bases: baseWithHistPlot

directed = False

nest.graphstatistics.centrality module

class nest.graphstatistics.centrality.Betweenness(G, optionsDict)

Bases: baseWithHistPlot

class nest.graphstatistics.centrality.Eigenvector(G, optionsDict)

Bases: baseWithHistPlot

class nest.graphstatistics.centrality.Katz_alpha_0_01(G, optionsDict)

Bases: baseWithHistPlot

class nest.graphstatistics.centrality.Katz_alpha_0_1(G, optionsDict)

Bases: baseWithHistPlot

class nest.graphstatistics.centrality.Katz_alpha_10_pow_m10(G, optionsDict)

Bases: baseWithHistPlot

class nest.graphstatistics.centrality.Kcore(G, optionsDict)

Bases: baseWithHistPlot

nest.graphstatistics.community module

class nest.graphstatistics.community.Louvain(G, optionsDict)

Bases: baseWithHistPlot

makePlot()

Make a series of histogram plots on the dataset

class nest.graphstatistics.community.Louvain_lcc(G1, optionsDict)

Bases: baseWithHistPlot

makePlot()

Make a series of histogram plots on the dataset

nest.graphstatistics.edge_activity module

class nest.graphstatistics.edge_activity.Cascading_behaviour_over_3_days(Gs, optionsDict)

Bases: baseTimeSeriesStats

makePlot()

class nest.graphstatistics.edge_activity.Inter_arrival_times(Gs, optionsDict)

Bases: baseTimeSeriesStats

makePlot()

class nest.graphstatistics.edge_activity.Most_active_edge_participation_per_day(Gs, optionsDict)

Bases: baseTimeSeriesStats

makePlot()

nest.graphstatistics.initial_visualisation module

class nest.graphstatistics.initial_visualisation.MatrixPlot(G, optionsDict)

Bases: baseStatClass

get_csv()

Get the output to write to the csv file

get_report()

Get the output to write to the main report file for non temporal statistics

makePlot()

nest.graphstatistics.motif_measures module

class nest.graphstatistics.motif_measures.Motif_Stats_M1(G, optionsDict)

Bases: baseStatClass

directed = True

class nest.graphstatistics.motif_measures.Motif_Stats_M10(G, optionsDict)

Bases: baseStatClass

directed = True

class nest.graphstatistics.motif_measures.Motif_Stats_M11(G, optionsDict)

Bases: baseStatClass

directed = True

class nest.graphstatistics.motif_measures.Motif_Stats_M12(G, optionsDict)

Bases: baseStatClass

directed = True

class nest.graphstatistics.motif_measures.Motif_Stats_M13(G, optionsDict)

Bases: baseStatClass

directed = True

class nest.graphstatistics.motif_measures.Motif_Stats_M2(G, optionsDict)

Bases: baseStatClass

directed = True

class nest.graphstatistics.motif_measures.Motif_Stats_M3(G, optionsDict)

Bases: baseStatClass

directed = True

class nest.graphstatistics.motif_measures.Motif_Stats_M4(G, optionsDict)

Bases: baseStatClass

directed = True

class nest.graphstatistics.motif_measures.Motif_Stats_M6(G, optionsDict)

Bases: baseStatClass

directed = True

class nest.graphstatistics.motif_measures.Motif_Stats_M7(G, optionsDict)

Bases: baseStatClass

directed = True

class nest.graphstatistics.motif_measures.Motif_Stats_M8(G, optionsDict)

Bases: baseStatClass

directed = True

class nest.graphstatistics.motif_measures.Motif_Stats_M9(G, optionsDict)

Bases: baseStatClass

directed = True

class nest.graphstatistics.motif_measures.Triadic_census(G, optionsDict)

Bases: baseStatClass

directed = True

nest.graphstatistics.path_statistics module

class nest.graphstatistics.path_statistics.Path_Dist(G, optionsDict)

Bases: baseWithHistPlot

class nest.graphstatistics.path_statistics.Path_Dist_LSCC(G1, optionsDict)

Bases: baseWithHistPlot

nest.graphstatistics.spectral module

class nest.graphstatistics.spectral.Adj_LCC_Top_Spectra(G1, optionsDict)

Bases: baseWithHistPlot

class nest.graphstatistics.spectral.Adj_LCC_Top_Svd(G1, optionsDict)

Bases: baseWithHistPlot

class nest.graphstatistics.spectral.Adj_LCC_Top_Svd_NoWeight(G1, optionsDict)

Bases: baseWithHistPlot

class nest.graphstatistics.spectral.Lap_LCC_Spectra(G1, optionsDict)

Bases: baseWithHistPlot

class nest.graphstatistics.spectral.Lap_LCC_Spectra_NoWeight(G1, optionsDict)

Bases: baseWithHistPlot

class nest.graphstatistics.spectral.RwLap_LCC_Spectra(G1, optionsDict)

Bases: baseWithHistPlot

class nest.graphstatistics.spectral.RwLap_LCC_Spectra_NoWeight(G1, optionsDict)

Bases: baseWithHistPlot

class nest.graphstatistics.spectral.SymAdj_LCC_Top_Spectra(G1, optionsDict)

Bases: baseWithHistPlot

class nest.graphstatistics.spectral.SymAdj_LCC_Top_Spectra_NoWeight(G1, optionsDict)

Bases: baseWithHistPlot

Module contents